I see that my questions was highly ambiguous/unclear. Martyn saw
through it anyway. pdbcur does what I want.
Andreas
On 10/08/2011 5:32, Martyn Winn wrote:
If you mean what I think you mean, then use the SUMMarise option of
pdbcur. That gives output like:
Chain "A" has 505 residue
If you mean what I think you mean, then use the SUMMarise option of
pdbcur. That gives output like:
Chain "A" has 505 residues
in 7 spans: 1-305 307-500 711-711 716-716 719-719 721-722 730-730
0 residues have alternative conformations
Composition: ALA 23 ARG 23 ASN 36 ASP 24
Dear all,
how do you extract segments from a pdb file, so that from an input pdb
file you get output like this:
10-103, 120-174, 200-240
or, better yet:
A: 10-103, 120-174, 200-240
B: 10-104, 120-174, 199-241
if the N terminus is missing and there are two gaps in the structure.
I tend to o
