Re: [ccp4bb] pdbset bug - seqres record

2008-07-11 Thread Martyn Winn
> It seems to me that posting in ccp4bb is one of the correct ways to > report a problem. Am I wrong? The other option is to send it to > [EMAIL PROTECTED], but I assume that this address is subscribed to ccp4bb > anyway. > > Ed. Herewith the official line: The correct way of reporting problem

Re: [ccp4bb] pdbset bug - seqres record

2008-07-11 Thread Ed Pozharski
bulletin board [mailto:[EMAIL PROTECTED] On Behalf Of Ed Pozharski > Sent: Thursday, July 10, 2008 2:31 PM > To: CCP4BB@JISCMAIL.AC.UK > Subject: [ccp4bb] pdbset bug - seqres record > > There is a bug in pdbset: when you output a sequence (using "SEQU PDB"), the > res

Re: [ccp4bb] pdbset bug - seqres record

2008-07-10 Thread Dunten, Pete W.
, 2008 2:31 PM To: CCP4BB@JISCMAIL.AC.UK Subject: [ccp4bb] pdbset bug - seqres record There is a bug in pdbset: when you output a sequence (using "SEQU PDB"), the residue names are shifted to the left by one position. Here is how it looks like: In PDB-file downloaded from the PDB: SEQRES

[ccp4bb] pdbset bug - seqres record

2008-07-10 Thread Ed Pozharski
There is a bug in pdbset: when you output a sequence (using "SEQU PDB"), the residue names are shifted to the left by one position. Here is how it looks like: In PDB-file downloaded from the PDB: SEQRES 5 A 171 ALA THR CYS ... PDBSET output: SEQRES 5 A 171 ALA THR CYS ... I lo