Re: [ccp4bb] homology modelling using sequence alignment

2010-03-03 Thread Rotem Sertchook
Very easy way is the Swiss-Model server via the alignment mode Good luck Rotem On 4 Mar, 2010, at 0:59, Brett, Thomas wrote: Dear all: I am trying to create a homology model of a coiled-coil for use in molecular replacement. I have a template poly-ala coiled coil that I like to use, so that

Re: [ccp4bb] homology modelling using sequence alignment

2010-03-03 Thread Sean Seaver
>I am trying to create a homology model of a coiled-coil for use in molecular >replacement. I have a template poly-ala coiled coil that I like to use, so that is fine. >I want to thread my sequence onto the helix and am trying to find a server/easy >program that will do this. As a starting point

[ccp4bb] homology modelling using sequence alignment

2010-03-03 Thread Brett, Thomas
Dear all: I am trying to create a homology model of a coiled-coil for use in molecular replacement. I have a template poly-ala coiled coil that I like to use, so that is fine. I want to thread my sequence onto the helix and am trying to find a server/easy program that will do this. I want to use