Dear Young-Tae,
The program Twister (Strelkov and Burkhard, 2002) can calculate this,
among other things. If you are interested I would gladly send you
the program.
Of course one should look into the reason for your helix having
an aberrant geometry. If it is just a slightly distorted a-helix
th
Dear colleagues,
I am analyzing a helical segment that looks a bit off from the
traditional alpha-helix. Does anyone knows a program for calculating
alpha helix translation per residue along the helical axis?
Thanks,
Young-Tae
Young-Tae Lee, Ph. D.
Research Associate
David Goodin lab
Dept.
