Re: [ccp4bb] exclude range within data in scala , discontinuous run in scala problem

2008-03-17 Thread hari jayaram
Hi Phil,Thanks for your email. I did get it to work with the options you suggested . i.e Toggle ON "Override automatic definition of runs to mark discontinuities in data Toggle ON Define Runs Toggle OFF Use run 1 as reference run. Setup runs as follows ( intended to exclude batches 200 to 400

Re: [ccp4bb] exclude range within data in scala , discontinuous run in scala problem

2008-03-15 Thread Phil Evans
You are right: this is a bug I should fix sometime Assigning two runs should work though You should not assign a reference run, and you shouldn't need to reassign the datasets Best wishes Phil On 14 Mar 2008, at 21:45, hari jayaram wrote: Hi. I did try that beforehand when I tried exclud

Re: [ccp4bb] exclude range within data in scala , discontinuous run in scala problem

2008-03-14 Thread hari jayaram
Hi. I did try that beforehand when I tried excluding a "range" of batches with the ccp4i gui But I got an error Scala: *** Gap in "time" (rotation) *** Sorry...both versions of the protocol for handling a bad internal wedge are giving me either a "gap in rotation" error or a "Run 2 has no

Re: [ccp4bb] exclude range within data in scala , discontinuous run in scala problem

2008-03-14 Thread Phil Evans
In ccp4i Scala task, click to open the "Excluded data" panel, click on "Exclude selected batches" There you can define one or more ranges of batches or lists to exclude If you just want to exclude the last part you can define a range eg 301 to 999 You don't need to explicitly define runs

Re: [ccp4bb] exclude range within data in scala , discontinuous run in scala problem

2008-03-14 Thread Meyer, Peter
s is that the "RUN 1 REFERENCE" is conflicting with assigning both runs the same dataset name, but that's only a guess. Good luck, Pete -Original Message- From: CCP4 bulletin board on behalf of hari jayaram Sent: Fri 3/14/2008 1:57 PM To: CCP4BB@JISCMAIL.AC.UK Subject: [c

[ccp4bb] exclude range within data in scala , discontinuous run in scala problem

2008-03-14 Thread hari jayaram
Hi I am trying to exclude a bad wedge of data during scaling in scala in the newest ccp4 ( fink install this morning from W.G Scotts sage.ucsc Binaries ..so they should be version 6) The batches I need are 1 to 200 and 400-720 I have clicked the "Override automatic definition of runs to mark disco