Dear Eike:
I think I was still asleep when I sent that last email. I am very
sorry for writing "Eric". Maybe I need to get glasses.
tcsh and zsh are both much more user-friendly than bash, and most
crystallography programs seem to assume the user is using tcsh, so
that might be the best
Hello Bill,
thanks a lot for making such big effort.
It is a real pity but the syntax does not work properly. However, I am
more or less convinced now that the whole thing is a bash / (t)csh
related problem. It might be the easiest way just to switch to a
different sh flavour as login shell. I ho
hallo eike,
the hint of William Scott was not to source the '*.def' files, but to
source either the
'/usr/local/software/ccp4/ccp4-6.0.2/include/ccp4.setup-bash'
if your default shell is the bash. or to source the
'/usr/local/software/ccp4/ccp4-6.0.2/include/ccp4.setup'
if your shell is the
Hello again,
sourcing environ.def or ccp4.setup-bash did not help to make it work.
Sourcing default.def results in
--
bash: memory: command not found
bash: !FITING_NR=50: command not found
bash: !TRAING_NR=50: command not fou
Probably. You should source either the first or the second file depending
on your shell (the first for bash, the second for tcsh/csh). That might
be the cause of your subsequent problem.
For purposes of debugging, can you send us output for the following three
commands:
echo $PATH
echo $CCP4
Hello again,
thanks to some people for their fast and helpfully very detailed advice:
Including
source /usr/local/software/ccp4/ccp4-6.0.2/include/ccp4.setup-bash
source /usr/local/software/ccp4/ccp4-6.0.2/include/ccp4.setup
On Fri, May 16, 2008 1:06 pm, Eike Schulz wrote:
> Hello everybody,
>
>
>
> setenv CCP4_MASTER /usr/local/software/ccp4
> setenv CCP4 $CCP4_MASTER/ccp4-6.0.2
>
For bash, zsh, etc, you need to start with
export CCP4
Hello everybody,
once more a beginners question on some probably Linux related problem.
Eventhough my ccp4 installation seemed to work fine all the way MTZDUMP
and the applications which use it (namely refmac ...) unfortunatly fail
with the following error:
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