Re: [ccp4bb] contact density

2007-08-31 Thread Eleanor Dodson
Look at the MSDpisa page: http://www.ebi.ac.uk/msd-srv/prot_int/pistart.html reached from http://www.ebi.ac.uk/msd/ It probably tells you much of what you wantt o know.. Eleanor Mary Rorick wrote: Hi, I'm a evolution/genetics grad student trying to address protein questions. I'd like to f

[ccp4bb] contact density

2007-08-23 Thread Mary Rorick
Hi, I'm a evolution/genetics grad student trying to address protein questions. I'd like to figure out the easiest way to extract contact density (and possibly higher order contact traces in the future) from PDB files or SCOP domains. I'm wondering if there is a server or a list somewher