CONTACT (CCP4) , PISA, ProFunc
What do you mean by analyse ? Residues contacting each other, surface
complementarity, buried surface area ?
Jürgen
On Apr 13, 2012, at 12:15 AM, Maher Alayyoubi wrote:
Hi guys,
Does any body know if there is a software that would analyse the
interface between a
Hi guys,
Does any body know if there is a software that would analyse the
interface between a protein molecule and its symmetry related
molecules in the crystal structure?
Thank you,
Maher
Thank you all,
Best
On Fri, 05 Aug 2011 09:19:55 +0200, Thomas Holder wrote:
On 08/05/2011 05:22 AM, Albert Guskov wrote:
have a look at SuperSym plugin for pymol
http://www.pymolwiki.org/index.php/SuperSym
Or the Supercell script. It has less features than SuperSym but does
not require cctbx
symmetry related molecules can be generated in pymol by :
1. opening the coordinates in pymol
2. Actions, generate, symmetry mates, radius
On 08/05/2011 05:22 AM, Albert Guskov wrote:
have a look at SuperSym plugin for pymol
http://www.pymolwiki.org/index.php/SuperSym
Or the Supercell script. It has less features than SuperSym but does not
require cctbx module.
http://pymolwiki.org/index.php/Supercell
Cheers,
Thomas
--
Thom
Hi Yuri,
have a look at SuperSym plugin for pymol
http://www.pymolwiki.org/index.php/SuperSym
Best regards,
Albert
*Albert GUSKOV (Dr) *| Research Fellow | Division of Structural &
Computational Biology | Nanyang Technological University
Proteos 7-01, Biopolis Drive 61, Singapore 138673 Tel: (65) 6
Whats the best way to visualize all the symmetry related molecules, I
know COOT will show them as backbone.
I was looking for publication quality images...PyMol maybe?
thank you for suggestions
--
Yuri Pompeu
