Re: [ccp4bb] Suggestions to improve resolution of protein crystals

2021-03-24 Thread Fred Vellieux
Hi, In addition to all that's been suggested so far: when I was facing such problems I always tried the (commercially available) additive screens (additive kits, whatever they are called nowadays). This means setting up quite a few crystallisation experiments (you already have conditions in w

Re: [ccp4bb] Suggestions to improve resolution of protein crystals

2021-03-23 Thread Ashish Kumar
Hi Saurabh, I have also encountered a similar problem. Sometimes, though your protein looks pure in size exclusion chromatography, but actually is not very pure and may contain traces of partially unfolded form or some transient oligomeric forms. In such a case, your size exclusion profile would b

Re: [ccp4bb] Suggestions to improve resolution of protein crystals

2021-03-22 Thread adarsh kumar
Dear Saurabh I would like to share something that worked for me. I was in a similar situation, though my crystals weren't as beautiful as yours are. I followed Alexander McPherson's Crystallization of Biological Macromolecules and what ultimately worked is as follows: I did something called iterat

Re: [ccp4bb] Suggestions to improve resolution of protein crystals

2021-03-22 Thread Patrick Shaw Stewart
Hi Saurabh Of course you should use "rMMS" microseeding. See below I hope it works ! Best wishes, Patrick -- Forwarded message - From: Patrick Shaw Stewart Date: Mon, Sep 9, 2019 at 10:12 AM Subject: Re: [ccp4bb] Optimization from needle shaped crystals To: David Briggs Cc:

Re: [ccp4bb] Suggestions to improve resolution of protein crystals

2021-03-22 Thread Navdeep Sidhu
Dear Saurabh, It's well known that good-looking crystals can have poor internal order, and therefore yield poor diffraction, and vice versa. As others have pointed out, it's crucial to check the quality of diffraction at room temperature (RT). Just to add a bit to that: There's a nice book that

Re: [ccp4bb] Suggestions to improve resolution of protein crystals

2021-03-21 Thread Thomas, Leonard M.
s/mcl From: CCP4 bulletin board on behalf of Saurabh Upadhyay Sent: Sunday, March 21, 2021 1:19 PM To: CCP4BB@JISCMAIL.AC.UK Subject: Re: [ccp4bb] Suggestions to improve resolution of protein crystals Dear Everton and Nukri, Thank you for your kind reply, we

Re: [ccp4bb] Suggestions to improve resolution of protein crystals

2021-03-21 Thread Saurabh Upadhyay
Dear Everton and Nukri, Thank you for your kind reply, we were also speculating that there could be some issues with cryoprotection. We have used two cryoprotectants naming; Parabar (10312) and Paraffin Oil from Hampton Research company. We have also used glycerol and respective mother liquors as

Re: [ccp4bb] Suggestions to improve resolution of protein crystals

2021-03-21 Thread Nukri Sanishvili
Dear Saurab, It's a shame these crystals do not diffract well - they look so good! I assume the diffraction you saw was recorded at cryo temperatures? If so, it is possible that you may be damaging the crystals during cryo-pretection and cryo-cooling. Before you go too deep into changing the crysta

Re: [ccp4bb] Suggestions to improve resolution of protein crystals

2021-03-21 Thread Éverton
Dear Saurabh, Your crystals are gorgeous! Which cryoprotectant did you use? Best, Everton. Sent from my iPhone > On Mar 21, 2021, at 11:04 AM, Saurabh Upadhyay > wrote: > >  > Dear All, > > I am trying to crystalize a protein, which occurs in monomeric (60kDa) and > te