Best
Ray
On Sun, 3/10/19, Eleanor Dodson <176a9d5ebad7-dmarc-requ...@jiscmail.ac.uk>
wrote:
Subject: Re: [ccp4bb] Protein modeling issue
To: CCP4BB@JISCMAIL.AC.UK
Date: Sunday, March 10, 2019, 3:40 PM
Both
REFMAC and COOT have an option to
Both REFMAC and COOT have an option to regularise (coot) or idealise
(refmac) a structure. These options will correct bad gemetry if possible,
but pay no attention to the fit to density.
In general i think it is sensible to inspect the map for regions where
there are serious errors high lighted. H
Hi folks,
The WHATIF server found the following issue in evaluating a protein structure.
Structure Z-scores, positive is better than average:
chi-1 / chi-2 rotamer normality : -7.278 (bad ( -3.8,
1.6) )
RMS Z-scores, should be close to 1.0:
Improper dihedral distribut
