Hi Sayli -
PrePPI may be helpful if you're interested in interactions among human proteins.
http://honig.c2b2.columbia.edu/preppi/
Cheers,
Jared
Dear Sayli,
I have used cluspro in past:
https://cluspro.bu.edu/publications.php
Kozakov D, Hall DR, Xia B, Porter KA, Padhorny D, Yueh C, Beglov D, Vajda
S. The ClusPro web server for protein-protein docking. *Nature Protocols.*2017
Feb;12(2):255-278
Best,
Dipak
On Fri, Mar 2, 2018 at 3:28
Dear Sayli
Here are some options from Table 10.1 of this book chapter
https://link.springer.com/chapter/10.1007/978-94-024-1069-3_10
cons-PPISP
Uses sequence profiles and solvent accessibility for residues and their
neighbours
http://pipe.scs.fsu.edu/ppisp.html
Dear all,
Can anyone help me with a web server or method for prediction of
interfaces for protein-protein interaction?
Thanks and best regards,
Sayli Dalal
Post-Doctoral Fellow
Dept. of Biophysics
NIMHANS
