Re: [ccp4bb] Phaser_EP

2011-05-31 Thread Randy J. Read
I thought it would be good to follow up with the solution to this problem, in case someone else has been suffering with it in silence. It turns out that, at some point, the Windows version of CCP4 release 6.1.13 included a newer version of Phaser (2.2.1), but the ccp4i interface for that relea

Re: [ccp4bb] Phaser_EP

2011-05-29 Thread martyn . winn
To: CCP4BB@JISCMAIL.AC.UK Subject: [ccp4bb] Phaser_EP After updating CCP4 includin Phaser_EP I can not run it - it can not read my SIGFs - what is wrong? The error message is " SYNTAX ERROR: Use SIGFPOS SIGF(+) or SIG+ " but my mtz-labels are LABIN F+ = F_Fe1(+) SIGF+ = SIGF_Fe1(+) F

Re: [ccp4bb] Phaser_EP

2011-05-29 Thread Randy J. Read
Dear Ylva, If you're running from the ccp4i interface, it looks like a mismatch between Phaser version and ccp4i version. Some of the syntax changed between the version of Phaser released with CCP4 6.1 and the version that will be coming out with the imminent 6.2 release. So, for instance, you

Re: [ccp4bb] Phaser_EP

2011-05-28 Thread Ylva Lindqvist
Could my problem be because of switching from Windows_XP to Windows7??? Prof. Ylva Lindqvist Dept. of Medical Biochemistry & Biophysics Div. of Molecular Structural Biology KAROLINSKA INSTITUTET Tomtebodavägen 6 S-171 77 Stockholm, Sweden Phone +46 8 52487695 Mobile +46 708 264356 Fax +46 8 32

[ccp4bb] Phaser_EP

2011-05-28 Thread Ylva Lindqvist
After updating CCP4 includin Phaser_EP I can not run it - it can not read my SIGFs - what is wrong? The error message is " SYNTAX ERROR: Use SIGFPOS SIGF(+) or SIG+ " but my mtz-labels are LABIN F+ = F_Fe1(+) SIGF+ = SIGF_Fe1(+) F- = F_Fe1(-) SIGF- = SIGF_Fe1(-). I have changed them with SFTOOLS