Dear all,
Many thanks for such a great and quick feedback! Indeed, I forgot to run
molprobity.omegalyze without input, and I am bit ashamed of that *insert
blushed emoji here*. But now I can do what I was looking for and I am very
grateful for your input :)
Best wishes,
Joana
> On 4. Sep 202
Joana
The developers of molprobity.omegalyze have tried to make their tool easy
to use and understand by providing lots of help if you type the
command without inputs. This is a common technique that command line tools
employ to provide documentation.
> molprobity.omegalyze
usage: molprobity.omeg
Hi Joana,
unless you are constrained to a molprobity tool, you could use the CCP4
program ANGLES to list the omega angle for each residue. See
$CEXAM/unix/runnable/angles.exam
for an example.
Best,
Tim
On Fri, 4 Sep 2020 11:28:47 +0200
Joana Pereira wrote:
> Dear all,
>
> Does anyone know wh
n ;
> CCP4BB@JISCMAIL.AC.UK
> Subject: Re: [ccp4bb] Omega angles with molprobity
>
> Hi Robbie,
>
> Thanks for the quick response :) That was my first try but it does not list me
> the angles.. see the output below:
>
> Starting molprobity.omegalyze
&g
bbie
-Original Message-
From: CCP4 bulletin board On Behalf Of Joana
Pereira
Sent: Friday, September 4, 2020 11:29
To: CCP4BB@JISCMAIL.AC.UK
Subject: [ccp4bb] Omega angles with molprobity
Dear all,
Does anyone know which molprobity tool in ccp4/bin lists the omega angles
for each r
ct: [ccp4bb] Omega angles with molprobity
>
> Dear all,
>
> Does anyone know which molprobity tool in ccp4/bin lists the omega angles
> for each residue? I see Phenix provides a comprehensive validation based on
> Molprobity and, from what I understand, lists the omega angles for
Dear all,
Does anyone know which molprobity tool in ccp4/bin lists the omega
angles for each residue? I see Phenix provides a comprehensive
validation based on Molprobity and, from what I understand, lists the
omega angles for each residue. However, I am having troubles to find
which molprobi
