Re: [ccp4bb] Na acetate as purification buffer

2012-03-02 Thread Kevin Jin
Maybe you can this way. Use Na acetate to elute your protein, then use EDTA to remove the Ni from your protein, then buffer exchange or dialysis to remove EDTA. Kevin On Fri, Mar 2, 2012 at 5:50 AM, Santosh wrote: > Hi Anita, > As Artem noted, use of Histrap column at lower pH would not be a

Re: [ccp4bb] Na acetate as purification buffer

2012-03-02 Thread Santosh
Hi Anita, As Artem noted, use of Histrap column at lower pH would not be a great idea and unless you want to elute your protein using pH Step gradient http://www.gelifesciences.com/aptrix/upp00919.nsf/Content/A960DBAAE1C0C945C1257628001D29BB/$file/28404480AA.pdf You may also consider using CM (Carb

Re: [ccp4bb] Na acetate as purification buffer

2012-03-02 Thread Roger Rowlett
Classical protein purification by IEX, HIC, GEC, etc. is apparently a dying art. It is typically quite easy to purify proteins using non-affinity methods from overexpression mixtures using an AKTA system. (Gosh, in the old days we used to purify to homogeneity pro

Re: [ccp4bb] Na acetate as purification buffer

2012-03-02 Thread Artem Evdokimov
Proteins with high apparent pi value are often tricky because they tend to bind anionic substances such as nucleic acids, other proteins, glass, etc. Conversely given that most proteins have acidic-ish apparent pi its often worth looking into why a particular protein is basic as it may be a fact of

Re: [ccp4bb] Na acetate as purification buffer

2012-03-02 Thread Carlos Kikuti
You might be giving too much importance to the THEORETICAL pI of the protein. If it's supposed to be well charged at pH 7,4 (only a titration curve, and not simply knowing the pI will tell you this) and it's still precipitating, the problem might be due to a bad fold, for instance, or to the la

Re: [ccp4bb] Na acetate as purification buffer

2012-03-01 Thread Artem Evdokimov
This pH is generally incompatible with Ni IMAC, sorry :) If you have a high pI your best bet is to employ ion exchange as primary capture, specifically SP resin or if you're really lucky - CM resin. There are only relatively few proteins in E. coli that bind to CM resin at pH 5 and virtually none (

[ccp4bb] Na acetate as purification buffer

2012-03-01 Thread anita p
Hi all, Has anyone used sodium acetate buffer pH (4-5) for purifying histag protein on Histrap column (AKTA) followed by SEC? My protein has a pI of 9. I tried pH7.4 but it has precipitation problems. While doing buffer screening using 24 well hanging drop I found that lower pI onces are clear, so