Re: [ccp4bb] N-linked glycans

2018-04-20 Thread Paul Emsley
On 20/04/2018 16:57, F.Xavier Gomis-Rüth wrote: Thanks a lot, Jon. The resolution is very low (3.1Å) and the density is confusing, I was trying to rule out things. FWIW, 3.1Å is not very low for modelling N-linked glycans these days. I am not an expert in glycoproteins, if a boat GlcNAc is t

Re: [ccp4bb] N-linked glycans

2018-04-20 Thread F.Xavier Gomis-Rüth
Thanks a lot, Jon. The resolution is very low (3.1Å) and the density is confusing, I was trying to rule out things. I am not an expert in glycoproteins, if a boat GlcNAc is this extremely unlikely, I will try other things...😉. On 20/4/18 17:25, Jon Agirre wrote: I would be very, very surpris

[ccp4bb] N-linked glycans

2018-04-20 Thread F.Xavier Gomis-Rüth
Dear all, has anybody ever seen a GlcNAc in boat conformation attached to an asparagine and, if so, is there any reference for it? Thanks a lot in advance, Xavier --

Re: [ccp4bb] N-linked glycans mediate inter-molecular protein-protein interactions

2014-02-05 Thread Savvas Savvides
Dear Tianyu, I have found the recent review by: Nagae and Yamaguchi in Int. J. Mol. Sci. 2012, 13, 8398-8429; doi:10.3390/ijms13078398 quite a good starting point. best Savvas On 05 Feb 2014, at 19:53, Gmail wrote: > Dear colleagues, I am looking for structures of protein complexes in which

[ccp4bb] N-linked glycans mediate inter-molecular protein-protein interactions

2014-02-05 Thread Gmail
Dear colleagues, I am looking for structures of protein complexes in which N-linked glycans mediate inter-molecular protein-protein interactions. Can anyone point me in the right direction? Thanks! Tianyu Gmail via foxmail