There is a way to do this in pymol. Change the mouse mode to editing mode and
click the two ends of the loop, then you should be able to drag it around. I
don’t remember exactly how, but hopefully this helps.
Alternatively, you could delete the loop and input the structure into modeller
and ask
Hi everyone,
I am struggling to think about a fast way to move a loop away from a protein
domain. I have an alphafold model of a multidomain transmembrane protein that,
for a presentation, I would like to "adjust". Between the intracellular bit of
it and the extracellular part there is a intrin
