Dear All,
I am trying to superpose 2 chains from the same pdb file. I have
generated 2 separate pdb files, each with one chain, using PDBSET.
When I run LSQKAB with the 2 generated files (on UBUNTU 10.04, ccp4 6.2) it
fails to run. The 2 input files CONTAIN the columns for occupancie
Dear All,
I am trying to superpose 2 chains from the same pdb file. I have
generated 2 separate pdb files, each with one chain, using PDBSET.
When I run LSQKAB with the 2 generated files (on UBUNTU 10.04, ccp4 6.2) it
fails to run. The 2 input files CONTAIN the columns for occupancie
Dear All,
I am trying to superpose 2 chains from the same pdb file. I have
generated 2 separate pdb files, each with one chain, using PDBSET.
When I run LSQKAB with the 2 generated files (on UBUNTU 10.04, ccp4 6.2) it
fails to run. The 2 input files CONTAIN the columns for occupancie
side effect of forcing the
program to read in the XYZINF input file.
Norman
From: CCP4 bulletin board [mailto:ccp...@jiscmail.ac.uk] On Behalf
Of Anita Lewit-Bentley
Sent: 16 March 2009 14:59
To: CCP4BB@JISCMAIL.AC.UK
Subject: [ccp4bb] LSQKAB error
Dear all,
I am trying to compare several
Dear all,
I am trying to compare several related structures using LSQKAB. In
order to refine the superpositions, I'd like to use the option
"radius", to see the relative postion of certain residues within a
given distance from a common point.
The programme reads the commands OK:
" ALL A
