computer systems and checking Compliance
with our Code of Conduct and Policies.
-Original Message-
From: CCP4 bulletin board [mailto:ccp...@jiscmail.ac.uk] On Behalf Of
Paul Emsley
Sent: 08 June 2010 21:30
To: CCP4BB@JISCMAIL.AC.UK
Subject: Re: [ccp4bb] JLigand Coot link
Briefly (and top
rnface will improve in the not too distant
future.
Paul.
From: CCP4 bulletin board [ccp...@jiscmail.ac.uk] On Behalf Of Tim
Gruene [...@shelx.uni-ac.gwdg.de]
Sent: 08 June 2010 21:04
To: CCP4BB@JISCMAIL.AC.UK
Subject: Re: [ccp4bb] JLigand Coot link
Hi Sea
riginal Message-
From: CCP4 bulletin board [mailto:ccp...@jiscmail.ac.uk] On Behalf Of
Paul Emsley
Sent: 08 June 2010 21:30
To: CCP4BB@JISCMAIL.AC.UK
Subject: Re: [ccp4bb] JLigand Coot link
Briefly (and top-postingly),
Coot does not draw covalent bonds between non-tandem residues.
Coot will
computer systems and checking Compliance with our Code of
Conduct and Policies.
-Original Message-
From: CCP4 bulletin board [mailto:ccp...@jiscmail.ac.uk] On Behalf Of
Paul Emsley
Sent: 08 June 2010 21:30
To: CCP4BB@JISCMAIL.AC.UK
Subject: Re: [ccp4bb] JLigand Coot link
Briefly (and top
Policies.
-Original Message-
From: CCP4 bulletin board [mailto:ccp...@jiscmail.ac.uk] On Behalf Of
Paul Emsley
Sent: 08 June 2010 21:30
To: CCP4BB@JISCMAIL.AC.UK
Subject: Re: [ccp4bb] JLigand Coot link
Briefly (and top-postingly),
Coot does not draw covalent bonds between non-tandem
ove in the not too distant future.
Paul.
From: CCP4 bulletin board [ccp...@jiscmail.ac.uk] On Behalf Of Tim Gruene
[...@shelx.uni-ac.gwdg.de]
Sent: 08 June 2010 21:04
To: CCP4BB@JISCMAIL.AC.UK
Subject: Re: [ccp4bb] JLigand Coot link
Hi Sean,
do the liga
Hi Sean,
do the ligand and the Thr belong to the same chain, and did you check that the
distance between the bonding atoms is not beyond coot's cut-off?
Tim
On Tue, Jun 08, 2010 at 11:16:03AM -0700, Sean Gay wrote:
> I have used JLigand v 0.2.1 to create a link between a Thr residues and
> a c
I have used JLigand v 0.2.1 to create a link between a Thr residues and
a covalent adduct. The adduct refines well and shows up as a covalent
bond in PyMOL. However, when I'm in Coot there is no bond present
between the Thr OG1 and the ligand. I've loaded the Jligand link.lib
file that I create
