Re: [ccp4bb] Fwd: [ccp4bb] CCP4-6.4.0 source code building failed in Mac OS X 10.8.5

2014-03-04 Thread Marcin Wojdyr
On Tue, Mar 04, 2014 at 01:33:58PM +0800, wu donghui wrote: > > Here I attached the config.log file for your help. I have tried to use > either gcc-4.2.1 (Applications/Xcode.app/Contents/Developer/usr > --with-gxx-include-dir=/usr/include/c++/4.2.1), or There is some confusion here. The number 4.

Re: [ccp4bb] Fwd: [ccp4bb] CCP4-6.4.0 source code building failed in Mac OS X 10.8.5

2014-03-03 Thread Ethan Merritt
On Tuesday, 04 March 2014 01:33:58 PM wu donghui wrote: > Dear Tim, > > Here I attached the config.log file for your help. I have tried to use > either gcc-4.2.1 (Applications/Xcode.app/Contents/Developer/usr > --with-gxx-include-dir=/usr/include/c++/4.2.1), or > g++-4.2.1(/Applications/Xcode.app/

Re: [ccp4bb] Fwd: [ccp4bb] CCP4-6.4.0 source code building failed in Mac OS X 10.8.5

2014-03-03 Thread wu donghui
Dear Tim, Here I attached the config.log file for your help. I have tried to use either gcc-4.2.1 (Applications/Xcode.app/Contents/Developer/usr --with-gxx-include-dir=/usr/include/c++/4.2.1), or g++-4.2.1(/Applications/Xcode.app/Contents/Developer/usr --with-gxx-include-dir=/usr/include/c++/4.2.1

Re: [ccp4bb] Fwd: [ccp4bb] CCP4-6.4.0 source code building failed in Mac OS X 10.8.5

2014-03-03 Thread Marcin Wojdyr
BTW, we got one report from a sysadmin who has built ccp4 using Clang (Apple compiler 5.0) + gfortran 4.8 from: http://gcc.gnu.org/wiki/GFortranBinaries#MacOS So it's likely that at least one lab is using CCP4 built with Clang. I'm not aware of any benchmarks, though. Marcin On Mon, Mar 03, 2014

Re: [ccp4bb] Fwd: [ccp4bb] CCP4-6.4.0 source code building failed in Mac OS X 10.8.5

2014-03-03 Thread Harry Powell
Hi I think you must be doing something wrong if you can't run Mosflm from the ccp4 binary install - it runs for me. How are you trying to run it? If you need the compilers to build Mosflm then I *very* strongly recommend using the compilers I mentioned in my earlier e-mail - they are what the

Re: [ccp4bb] Fwd: [ccp4bb] CCP4-6.4.0 source code building failed in Mac OS X 10.8.5

2014-03-03 Thread Tim Gruene
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Dear Donghui, did you already take a look into config.log to read the error message why your gcc-compiler does not work? You should start at the end of the log file and scroll backwards until you find the error message. Best, Tim On 03/03/2014 03:51

[ccp4bb] Fwd: [ccp4bb] CCP4-6.4.0 source code building failed in Mac OS X 10.8.5

2014-03-03 Thread wu donghui
-- Forwarded message -- From: wu donghui Date: Mon, Mar 3, 2014 at 10:44 PM Subject: Re: [ccp4bb] CCP4-6.4.0 source code building failed in Mac OS X 10.8.5 To: Marcin Wojdyr Dear Marcin, The reason that I want to build from source is that running ipmosflm can not be done from b

Re: [ccp4bb] Fwd: [ccp4bb] CCP4-6.4.0 source code building failed in Mac OS X 10.8.5

2014-03-03 Thread Harry Powell
Hi If trying to build on Macs (OSX 10.5 - 10.9) I strongly recommend installing either the High Performance Computing gcc/gfortran or investing in the Intel Compilers. http://hpc.sourceforge.net/ http://software.intel.com/en-us/intel-compilers (if you have ) Performance-

[ccp4bb] Fwd: [ccp4bb] CCP4-6.4.0 source code building failed in Mac OS X 10.8.5

2014-03-03 Thread wu donghui
-- Forwarded message -- From: wu donghui Date: Mon, Mar 3, 2014 at 7:07 PM Subject: Re: [ccp4bb] CCP4-6.4.0 source code building failed in Mac OS X 10.8.5 To: Marcin Wojdyr Dear Marcin, Yes, I set CC=gcc-4.2.1 in cj.rc file or type in command line. As is shown, it can identify