Re: [ccp4bb] Exporting Omit Maps for use in Pymol using CCP4i FFT

2014-08-21 Thread Wei Shi
Thank you guys so much! Fixed! Best, Wei On Wed, Aug 20, 2014 at 4:13 PM, Christian Roth < christian.r...@bbz.uni-leipzig.de> wrote: > Hi Wei, > > have you supplied a valid pdb file? That is the mentioned missing > parameter. > > Cheers > > Christian > > > Am 20.08.2014 20:54, schrieb Wei Shi:

Re: [ccp4bb] Exporting Omit Maps for use in Pymol using CCP4i FFT

2014-08-20 Thread Christian Roth
Hi Wei, have you supplied a valid pdb file? That is the mentioned missing parameter. Cheers Christian Am 20.08.2014 20:54, schrieb Wei Shi: Hi all, I am trying to display F0-Fc omit map in PyMol. I got the mtz file from Phenix, and now use CCP4i FFT to generate the map for PyMol. I followed

Re: [ccp4bb] Exporting Omit Maps for use in Pymol using CCP4i FFT

2014-08-20 Thread Roger Rowlett
Did you enter a valid pdb filename for a coordinate file when selecting the option 'cover all atoms in pdb'? __ Roger Rowlett Gordon & Dorothy Kline Professor Department of Chemistry Colgate University On Aug 20, 2014 3:54 PM, "Wei Shi" wrote: > Hi all, > I am trying to display F

[ccp4bb] Exporting Omit Maps for use in Pymol using CCP4i FFT

2014-08-20 Thread Wei Shi
Hi all, I am trying to display F0-Fc omit map in PyMol. I got the mtz file from Phenix, and now use CCP4i FFT to generate the map for PyMol. I followed the instructions from the below link: http://www.p212121.com/2010/04/26/display-a-mtz-file-in-pymol/ And, I constantly got the following error me