Re: [ccp4bb] Crystallizing protein sitting in PBS

2011-11-16 Thread Ed Pozharski
On Wed, 2011-11-16 at 09:26 +, Tom Murray-Rust wrote: > That way you should be able to > quickly identify any hits that are due to salt, and which are likely > to be your protein. Just a footnote to Tom's excellent comment: It is possible to have actual protein crystals to grow alongside sal

Re: [ccp4bb] Crystallizing protein sitting in PBS

2011-11-16 Thread Gloria Borgstahl
A thing we frequently forget is that phosphate can be a precipitating agent try a phosphate grid screen, just like you would with ammonium sulfate. If your protein likes PBS, it may want to crystallize with phosphate See Enrico Stura's footprint screen for example On Tue, Nov 15, 2011 at 5:25 PM,

Re: [ccp4bb] Crystallizing protein sitting in PBS

2011-11-16 Thread Shilong Fan
Of course PBS should not be a first choice for screning crystal. But I will try all kinds of buffer until I got the structure. Nobady can tell you that you can't get crystal in the PBS buffer. and I will shot everything I have if I have enough beam time. Good luck.

Re: [ccp4bb] Crystallizing protein sitting in PBS

2011-11-16 Thread Tom Murray-Rust
Hi JK, As mentioned, phosphate salts are the main disadvantage - you can get round this by setting up two drops per well: one with your protein in PBS, and the other with PBS only. That way you should be able to quickly identify any hits that are due to salt, and which are likely to be your protei

Re: [ccp4bb] Crystallizing protein sitting in PBS

2011-11-16 Thread Herman . Schreuder
Jayakrishnan Nandakumar Sent: Wednesday, November 16, 2011 12:26 AM To: CCP4BB@JISCMAIL.AC.UK Subject: [ccp4bb] Crystallizing protein sitting in PBS Hi All, I have an RNA-binding protein that I can purify out of bacteria in PBS (Phosphate

[ccp4bb] Crystallizing protein sitting in PBS

2011-11-15 Thread Jayakrishnan Nandakumar
Hi All, I have an RNA-binding protein that I can purify out of bacteria in PBS (Phosphate buffered saline;137 mM NaCl, 2.7 mM KCl, 10 mM Na2HPO4, 2 mM KH2PO4), but which is insoluble in Tris/NaCl-based buffers. My guess would be that the inorganic phosphates (by mimicking RNA) are binding the prote