Re: [ccp4bb] Crystalization in low PH

2011-11-07 Thread Gloria Borgstahl
Glutaraldehyde works best at low pH On Mon, Nov 7, 2011 at 8:40 AM, Ed Pozharski wrote: > On Mon, 2011-11-07 at 05:19 +, Sam Arnosti wrote: >> Hi everyone >> >> I have a protein that is extraordinarily stable at PH=3.0 or even 2.0. >> >> I want to crystallize it in the  low PH and compare the

Re: [ccp4bb] Crystalization in low PH

2011-11-07 Thread Katherine Sippel
I had a protein that loved pH 3 if it was holo (citrate, ammonium bromide, and PEG) or pH 4 when apo. Those were microbatch conditions rather than vapor diffusion. If there is no indication of gross structural changes you might consider different pH soak on your crystals rather than finding a new c

Re: [ccp4bb] Crystalization in low PH

2011-11-07 Thread Ed Pozharski
On Mon, 2011-11-07 at 05:19 +, Sam Arnosti wrote: > Hi everyone > > I have a protein that is extraordinarily stable at PH=3.0 or even 2.0. > > I want to crystallize it in the low PH and compare the differences between > the crystals in regular PH and low PH. > > I was wondering how people

Re: [ccp4bb] Crystalization in low PH

2011-11-07 Thread Heping Zheng
I remembered that people had crystallize a series of streptavidin-2-iminobiotin structures at a low pH. If it might help, check the following PDBIDs: 2RTD 2RTE 2RTI 2RTK 2RTL > Hi everyone > > I have a protein that is extraordinarily stable at PH=3.0 or even 2.0. > > I want to crystallize it in

Re: [ccp4bb] Crystalization in low PH

2011-11-07 Thread Enrico Stura
I have crystallized in PEG with citrate at pH 3. If you want to go lower I would suggest maleate: effective pH range pKa 25°Cbuffer 1.2-2.6 1.97 maleate (pK1) 2.2-6.53.13 citrate (pK1) Enrico. On Mon, 07 Nov

Re: [ccp4bb] Crystalization in low PH

2011-11-07 Thread Craig A. Bingman
I'm not convinced that you need a conventional buffer at pH 2 or 3. At pH 2, the hydrogen ion concentration is 10 mM. If you want to use something else, the second pKa for sulfuric acid is around 2. The first pKa for phosphoric acid is slightly higher than 2. Lactic acid has a pKa close to 3

Re: [ccp4bb] Crystalization in low PH

2011-11-07 Thread George M. Sheldrick
Tendamistat (1OK0) was crystallized at pH 1.3 and diffracted to 0.93A. George On Mon, Nov 07, 2011 at 05:19:29AM +, Sam Arnosti wrote: > Hi everyone > > I have a protein that is extraordinarily stable at PH=3.0 or even 2.0. > > I want to crystallize it in the low PH and compare the differen

Re: [ccp4bb] Crystalization in low PH

2011-11-07 Thread Boaz Shaanan
behalf of Sam Arnosti [meisam.nosr...@gmail.com] Sent: Monday, November 07, 2011 7:19 AM To: CCP4BB@JISCMAIL.AC.UK Subject: [ccp4bb] Crystalization in low PH Hi everyone I have a protein that is extraordinarily stable at PH=3.0 or even 2.0. I want to crystallize it in the low PH and c

[ccp4bb] Crystalization in low PH

2011-11-06 Thread Sam Arnosti
Hi everyone I have a protein that is extraordinarily stable at PH=3.0 or even 2.0. I want to crystallize it in the low PH and compare the differences between the crystals in regular PH and low PH. I was wondering how people set up the boxes in low PH, as usual buffers are mostly less acidic.