I have seen these type of cases. They cause problem. They may come from O, from
cns or other programs. Origins may even not be known. My solution was that if
an atom has coordinates 9998.000 or more then consider them absent (i.e. set
occupancies 0).
On 6 Sep 2011, at 14:30, Kevin Cowtan wr
OK, here's the solution (also to BB in case anyone else has this problem).
The PDB file appears to come from CNS.
The coordinate file contains the following atoms:
ATOM 2244 CG LEU A 452.000.000.000 1.00 0.00 A
ATOM 2245 CD1 LEU A 452.000.000.000 1
Can you send the command script, and mapdump output for any input maps?
Also, if you are entering a PDB file, the cell, spacegroup, and an idea
of range of X, Y, and Z values?
On 09/06/2011 09:56 AM, Ingo P. Korndoerfer wrote:
hello,
it seems i am recently getting the above error quite a lot
hello,
it seems i am recently getting the above error quite a lot in mapmask. i
have searched for a solution, but only found the problem mentioned a
few times with no precise solution indicated.
would there be a way to find out HOW MUCH memory mapmask is hoping for ?
i do have 2 Gb of memory and
