Re: [ccp4bb] CASP ROLL needs your structures!

2013-01-20 Thread Randy Read
Hi, The definition of "new fold" at the PDB depends on how it is categorised in SCOP version 1.75, which was released in June 2009. Once the SCOP database is updated again, we'll see how many new folds were really represented by PDB entries deposited in the last few years. Randy - Randy

Re: [ccp4bb] CASP ROLL needs your structures!

2013-01-19 Thread Ethan Merritt
On Saturday, 19 January 2013, Luecke, Hartmut wrote: > > In recent CASPs, there has been a shortage of new folds (according to PDB > exactly zero new folds deposited since 2009) and membrane protein targets. I have been wondering about that. It is true that the PDB has not listed any "new folds"

[ccp4bb] CASP ROLL needs your structures!

2013-01-19 Thread Luecke, Hartmut
CASP* ROLL# *Critical Assessment of Structure Prediction #not a new sushi item In recent CASPs, there has been a shortage of new folds (according to PDB exactly zero new folds deposited since 2009) and membrane protein targets. The lack of such targets makes it problematic to reliably quantify th