Hi Marilyn,
if 'some luck' happens not to be the case you may be able to create a
good cif file for the covalent protein-sugar bond with the JLigand
tool (CCP4 suite). that tool allowed me to connect an isoaspartate
residue at both ends with my protein chain so that neither coot nor
refma
Hi Marilyn,
I have been struggling with carbohydrates in the pre Glyco module era, which
was *not nice*. However, the following strategy works reasonably well:
1) Get the XYP monomer with the "get monomer" command.
2) Move the XYP manually in its electron density. This can be very
ap
