avid C Briggs
Hohenester Lab
Department of Life Sciences
Imperial College London
UK
http://about.me/david_briggs
From: CCP4 bulletin board on behalf of Daniel Rigden
Sent: 16 February 2018 08:29:29
To: CCP4BB@JISCMAIL.AC.UK
Subject: Re: [ccp4bb] 3D Structure
Another topology-independent method is CLICK, available as a server here
http://cospi.iiserpune.ac.in/click/
You might also want to try FATCAT which considers potential flexibility
of separate subdomains in its structural alignment
http://fatcat.burnham.org/fatcat-cgi/cgi/fatcat.pl?-func=sear
On Thursday, February 15, 2018 3:16:50 PM PST Nicola Evans wrote:
> I have recently solved a novel structure which previously did not have any
> structural homologues (as related by sequence identity). I was wondering if
> anyone could recommend a 3D structural search engine? I used the Dali serv
Dear Nicola,
PDBeFold is great too: http://www.ebi.ac.uk/msd-srv/ssm/
Best wishes,
Tomas
On Thu, Feb 15, 2018 at 11:16 PM, Nicola Evans wrote:
> I have recently solved a novel structure which previously did not have any
> structural homologues (as related by sequence identity). I was wondering i
I have recently solved a novel structure which previously did not have any
structural homologues (as related by sequence identity). I was wondering if
anyone could recommend a 3D structural search engine? I used the Dali server
which has been recommended to me in the past (and with past success)
