Hello,
My apologies for sending the previous post to the wrong BB.
Zhijie
-Original Message-
From: Zhijie Li
Sent: Friday, August 08, 2014 11:10 AM
To: R.D. Oeffner ; CCP4BB@JISCMAIL.AC.UK
Subject: Re: [phenixbb] local BLAST server
Hi Rob,
The BLAST nr database (fasta format) can b
Hi Rob,
The BLAST nr database (fasta format) can be downloaded from the NCBI ftp:
ftp://ftp.ncbi.nlm.nih.gov/blast/db/FASTA/
As I remember it is the nr.gz file. When unzipped the file is called "nr".
According to BLAST the nr database does contain PDB entries.
http://blast.ncbi.nlm.nih.gov/Blast
