Re: [ccp4bb] Error message while refining protein-DNA complex structure in Refmac5

a > > > > > E. Rajakumara > Postdoctoral Fellow > Strcutural Biology Program > Memorial Sloan-Kettering Cancer Center > New York-10021 > NY > 001 212 639 7986 (Lab) > 001 917 674 6266 (Mobile) > > > > Get your preferred Email name! > Now y

Re: [ccp4bb] Coot Problem! adding r-nucleotide in DNA

Thanks to Paul and Christian..for responding very quickly to my query. I tried all versions of coot and it worked in only ver 0.4. Now everything is fine. Cheers! Yusuf On Thu, Feb 26, 2009 at 7:04 PM, Yusuf Akhter wrote: > Hi everybody! > I am using coot version 0.5. > I am trying

[ccp4bb] Coot Problem! adding r-nucleotide in DNA

Hi everybody! I am using coot version 0.5. I am trying to build a DNA sequence in my model. At certain positions when i add residues and then used "simple mutate" to make it according to real sequence, it always add ribonucleotide (guanine ribonucleotide, Gr) in place of deoxyribonucleotide (guani

Re: [ccp4bb] Refmac out-put file header information

king the > box to complete the reflection list and extend your > input freeR set. > > Regards, > Mitch > > > -Original Message- > From: CCP4 bulletin board [mailto:[EMAIL PROTECTED] On Behalf Of Yusuf > Akhter > Sent: Friday, August 08, 2008 2:20 AM > To

Re: [ccp4bb] Refmac out-put file header information

: 12072 Have anybody some suggestions?? Thanks, yusuf -- Yusuf Akhter EMBL Hamburg c/o DESY, Notkestraße 85, 22603 Hamburg, Germany Thank you very much to Artem, Lijun, Dale and Paul for giving me great suggestions regarding my earlier query on D to L amino acid residues. Now one more problem

[ccp4bb] Refmac out-put file header information

am using Refmac for refinement. My data is 95.4% of completeness at Signal/noise >=-3. I noticed that in the header of out-put PDB file from Refmac shows 100% completeness. Is it a bug?? May somebody tell me where the problem is? Thanks in advance. yusuf -- Yusuf Akhter EMBL Hamburg

[ccp4bb] D-Amino acids to L-Amino acids

L-amino acids?? Is there any option in Coot for that?? Thanks in advance, yusuf -- Yusuf Akhter EMBL Hamburg c/o DESY, Notkestraße 85, 22603 Hamburg, Germany - This mail sent through IMP: http://horde.org/imp/

[ccp4bb] D-Amino acids to L-Amino acids

L-amino acids?? Is there any option in Coot for that?? Thanks in advance, yusuf -- Yusuf Akhter EMBL Hamburg c/o DESY, Notkestraße 85, 22603 Hamburg, Germany - This mail sent through IMP: http://horde.org/imp/