[ccp4bb] Help for BALBES Results

Hi All, I want to get the phases from balbes. have submitted my data to BALBES (online ccp4i). I am getting the results in txt file only. I am not getting the mtz and model result files. I would be very thankful for suggestions. Thanks & Regards, [image: Mailtrack]

[ccp4bb] Help with omit map

Hi everyone, I have to generate the omit map of metal and coordinating residues of protein structure for the figure. Which program can be used to generate the omit map for my requirement. Thanks & Regards, To unsubscri

Re: [ccp4bb] error in coot

Thank you Paul.

Re: [ccp4bb] help with Buccaneer

Thanks to all for suggestions.

[ccp4bb] help with Buccaneer

Hi Everyone, I want to run the Buccaneer. I need Hendrickson-Lattman coefficients for it. How I can find Hendrickson-Lattman coefficients? Thanks & Regards,

Re: [ccp4bb] AW: [ccp4bb] error in phenix refinement

I am very thankful to all. >

Re: [ccp4bb] problem with AMPLE

Thank you Daniel.

[ccp4bb] problem with AMPLE

Hi everyone, I have run the ample for a 377 amino acids protein and generated 500 models. But I did not get any ensemble model and got error message that could not load any ensembles after running create_ensembles. I am here attaching the ample.log and debug.log file. Any one suggest me why this

Re: [ccp4bb] suggestion for structure solution of a protein with low sequence identity

Hi everyone, We are trying to solve a protein structure of 2.6 A. We have processed it with HKL2000. We have even tried processing with mosflm and xia2. It is in C2221 space group (checked by pointless) and data is not twinned. It has 31% identical with a search model and has 57% sequence coverage

[ccp4bb] suggestion for structure solution of a protein with low sequence identity

. But, I stucked at R free 41 and now i have amino acid 50 to 369 in both chains, still 49 amino acid at N terminal and 8 amino acid at C terminal are missing. *I have tried the ARP/wARP, but it does not work for it. * Thanks & Regards, VIKRAM DALAL Research Scholar Macromolec

Re: [ccp4bb] Help in running AMPLE

Thank you daniel Thanks & Regards, VIKRAM DALAL Research Scholar Macromolecular Crystallographic Unit Department of Biotechnology Indian Institute of Technology Roorkee (INDIA) On Fri, Oct 21, 2016 at 3:27 PM, Daniel Rigden wrote: > [image: Boxbe] <https://www.boxbe.co

Re: [ccp4bb] Help in running AMPLE

. Thanks & Regards, VIKRAM DALAL Research Scholar Macromolecular Crystallographic Unit Department of Biotechnology Indian Institute of Technology Roorkee (INDIA) On Fri, Oct 21, 2016 at 3:27 PM, Daniel Rigden wrote: > [image: Boxbe] <https://www.boxbe.com/overview> Daniel Ri

[ccp4bb] Help in running AMPLE

ards, VIKRAM DALAL Research Scholar Macromolecular Crystallographic Unit Department of Biotechnology Indian Institute of Technology Roorkee (INDIA)

Re: [ccp4bb] Software to know the common folds in a protein

Thank you all for suggestions. “Do not be embarrassed by your failures, learn from them and start again.” Thanks & Regards, VIKRAM DALAL Research Scholar Macromolecular Crystallographic Unit Department of Biotechnology Indian Institute of Technology Roorkee (INDIA) On Thu, Oct 13,

[ccp4bb] Software to know the common folds in a protein

Hi everyone, We are solving a protein structure and we want to know the folds which are present in it. Suggest me the best software or server which can be used to find the common folds in my protein. Thanks & Regards,