[ccp4bb] Assistant/Associate Professor positions in structural biology at Univ. of Iowa

2024-09-26 Thread Schnicker, Nicholas J
The Department of Biochemistry and Molecular Biology at the University of Iowa College of Medicine is inviting applications for a tenure-track Assistant or Associate Professor position. Successful applicants will be able to establish an independent, extramurally funded research program probing b

[ccp4bb] Calculation of energetics for many mutations

2024-02-06 Thread Schnicker, Nicholas J
Hi all, I'm looking for some suggestions for calculating energetics for an existing ligand bound protein structure. There are many mutations/combination of mutations within the ligand binding pocket that we'd like to make and then calculate energetics for all of them. Please let me know if you

Re: [ccp4bb] [External] Re: [ccp4bb] alternatives to Consurf server

2024-01-05 Thread Schnicker, Nicholas J
Hi Andre, I don't know if anyone mentioned Conservation-Colab, although it maps the conservation onto an AF model. https://zenodo.org/records/10062829 Cheers, Nick Nicholas Schnicker, PhD Director, Protein & Crystallography Facility Adjunct Assistant Professor, Molecular Physiology & Biophysics

Re: [ccp4bb] Where is M.Harding's website for metal coordination geometry

2019-05-07 Thread Schnicker, Nicholas J
Hi all, You can find archives for websites from http://web.archive.org/ Here is a link to Harding’s site from 2016 http://web.archive.org/web/20161031170012/http://tanna.bch.ed.ac.uk/ Xiaoshan- Depending on what you are looki

Re: [ccp4bb] preparation of citrate buffer pH3-6.5

2014-01-30 Thread Schnicker, Nicholas J
It’s a pain but I usually just make each pH of whatever buffer I’m using (if you make it concentrated then you’ll only have to do it once). Also, if you haven’t already found it, Hampton has a nice link to calculate volume of components while designing a tray as long as you tell it the concentr