Re: [ccp4bb] off topic: protease identification

2011-03-31 Thread S. Jack Lin
Hi Tom, You can try the MEROPS database. There is a search feature called "What peptidases can cleave this bond". http://merops.sanger.ac.uk/cgi-bin/specsearch.pl Cheers, Jack On Thu, Mar 31, 2011 at 6:59 AM, Brett, Thomas wrote: > Hi all: > I was wondering if anyone had any tips on identify

Re: [ccp4bb] Extracting Amino Acid Sequence from PDB File

2009-08-13 Thread S. Jack Lin
Hi Buz, If you have Phenix, you can use the "phenix.print_sequence" tool to output the sequence in FASTA format. I believe MOLEMAN ( http://xray.bmc.uu.se/usf/xutil.html) can also perform similar function. My best, Jack On Thu, Aug 13, 2009 at 2:34 PM, Buz Barstow wrote: > Hi All, > > Does any