Re: [ccp4bb] extracting PHENIX structures (help-6435)

2015-01-26 Thread PC
Thank you, Rachel. I will try this suggestion out. -Original Message-From: kra...@rcsb.rutgers.eduSent: Mon, 26 Jan 2015 09:22:00 -0700To: patrick.coss...@inbox.comSubject: Re: [ccp4bb] extracting PHENIX structures (help-6435) Dear Patrick, You can try to write a scrip

Re: [ccp4bb] Ramachandran maps

2014-12-11 Thread PC
t;procheck /data/pdb/p1amt.pdb A 1.5 >> >> It also generates a few other useful charts for your structure >> >> On 09.12.2014 18:47, PC wrote: >>> Hi guys, >>> >>> Sorry for the repost in COOT/CCP4/PHENIX. >>> It is

[ccp4bb] Ramachandran maps

2014-12-09 Thread PC
Hi guys, Sorry for the repost in COOT/CCP4/PHENIX. It is possible on of the users in one of these communities might know the answer I was wondering if there is a small script I can use to generate the outline of the allowed regions of Ramachandran map on to which I can superimpose my coordinate

[ccp4bb] Biotech Validation Suite for Protein Structures

2014-08-29 Thread PC
What happened to this service? I was reading about it in a book (crystallography made crystal clear) but can't find it anymore.Did the EU shut it down?Biotech Validation Suite for Protein Structures Receive Notifications of Incoming Messages Easily monitor multiple email accounts & access the

[ccp4bb] FW: [ccp4bb] Please post this message

2014-08-27 Thread PC
 Hi,  I just subscribed to CCP4BB but I am trouble posting this message. Could  you please upload this Job advertisement.  Thanks much, Sudha  Postdoctoral Position in Structural Biology, Department of Physiology and Biophysics at Case Western Reserve University, Cleveland OH Laboratory of Dr

[ccp4bb] Off topic post

2014-08-27 Thread PC
Hi,Sorry this is off topic but I thought someone might know the answer, I used the "advanced search" option in the PDB and found 100 pdb hits, I can see them (small icons+ details) but I just want the names of the PDB's, as a list. I can't see an option to just get the list.Does anyone know how

[ccp4bb] ccp4 QTMG

2014-08-19 Thread PC
Hi,I used COOT mask map by atom selection and cut out a fragment of the map, then exported it and now I tried to open it in QTMG.It displays it as a unit cell,  I want one for a presentation, how can I combine it to display one image ?Thank you,Patrick Free 3D Earth Screensaver Watch the Eart