Re: [ccp4bb] CIF file Cannot Open by Coot

2024-08-21 Thread Martin Hu
Dear All, I sincerely appreciate everyone’s contributions and suggestions—the issue has now been resolved! Following Oliver's instructions, I used the Grad Web Server to obtain the coordinates and restraint files for input, then adjusted the conformation using real-space refinement in Coot. Th

Re: [ccp4bb] CIF file Cannot Open by Coot

2024-08-19 Thread Martin Hu
Dear All, Thank you all for your help. I’ve tried several approaches to input this file, including changing the format to mmCIF, importing it as coordinates, and checking the restraints in the file. However, I am still unable to install the experimental ligand structure into the protein. It see

[ccp4bb] CIF file Cannot Open by Coot

2024-08-15 Thread Martin Hu
Dear [Recipient's Name], I have downloaded a CIF file of a ligand of interest directly from WebCSD, which was originally obtained from experimental crystallography research, and attempted to import it into Coot. However, Coot indicates that it cannot read the file for some reason. I've also tri