Hi there:
You can use the PISA server. In addition, you can use “areaimol” in CCP4
package.
Best,
Maria
> El 29 jun 2023, a las 12:16, Thripthi Shenoy
> escribió:
>
> Hello everyone,
> I want to calculate the area of the protein active site and the area of its
> bound ligand in the active
Dear all:
Can I ask for some help-opinion on possible problems for a superdex200 column
to separate a glutaraldehyde-crosslinked sample?
We are using 0.1% Glutaraldehyde to crosslink and protein complex and after
incubation, we stop the reaction by adding 50mM Tris buffer. We have analyzed
the
I have also heard about Frodock. The primary reference:
J. I. Garzon, J. R. Lopéz-Blanco, C. Pons, J. Kovacs, R. Abagyan, J.
Fernandez-Recio, P. Chacón (2009) FRODOCK: a new approach for fast rotational
protein-protein docking Bioinformatics, 25, 2544-2551
If you go to the webpage (http://chac
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>> NameError: free variable 'textbuffer' referenced before assignment in
>> enclosing scope
>>
>> Marcin
>>
>> On Mon, Feb 09, 2015 at 05:20:41PM +0100, Maria Jose Sanchez Barrena
Dear all,
I am using Coot 0.8.1, that is part of the CCP4 version 6.1. When trying to run
PISA from Coot, after choosing the pdf file, I get the following message: “your
pisa version is too old. Need at least v1.06”. However, when running CCP4mg
(part of the same CCP4 package), I am able to run
