[ccp4bb] Unresolved density

2009-12-18 Thread Kadhirvel Saraboji
Hi all, In one of my 1.6Ang resolution structure, I came across a strange density. I tried to model this with PEG but after refinement still peaks appear around PEG at ~1.45-1.7 Ang. The images before and after PEG insertion is at:  http://mole.mbfys.lu.se/~saraboji/peg_density.jpg (Fo-Fc and

[ccp4bb] To identify specific type of interaction

2009-02-04 Thread Kadhirvel Saraboji
beta strands form a dimer interface, leading to an extended beta sheet shared between the two molecules, and would like to analyse how common they are. Thanks in advance! Saraboji Dr. Kadhirvel Saraboji Post-Doc, Molecular Biophysics, Center for Molecular Protein Science