[ccp4bb] [Off-topic] NMR manager position available

2023-03-03 Thread PULSARSTRIAN
There is a NMR manager position available at University of Oklahoma. *NMR Manager position at University of Oklahoma * *Organization:* Chemistry/Biochemistry *Job Location:* Oklahoma-Norman-Norman Campus *Schedule:* Full-time *Work Schedule:* Monday - Friday 8-5 *Salary Range:* Target Sa

Re: [ccp4bb] Way to resolve Ramachandra outliers in a structure

2023-03-03 Thread Medhanjali DasGupta
Very helpful, thank you so much! Medhanjali On Fri, Mar 3, 2023, 10:48 AM Nicholas Clark wrote: > Hi Medhanjali, > > In Coot, there are two additional options for "automated" correction of > Ramachandran outliers. You can find them under "Calculate". > > For the entire structure in the "Calcula

Re: [ccp4bb] Way to resolve Ramachandra outliers in a structure

2023-03-03 Thread Nicholas Clark
Hi Medhanjali, In Coot, there are two additional options for "automated" correction of Ramachandran outliers. You can find them under "Calculate". For the entire structure in the "Calculate->all molecule" tab, select Refine/Improve Ramachandran Plot. For a specific region, you can use the "Calcul

[ccp4bb] Way to resolve Ramachandra outliers in a structure

2023-03-03 Thread Medhanjali DasGupta
Hello all! Is there an easy way to fix the backbone angles in a protein structure to fix the Ramachandran outliers in said structure? Coot has the "Edit backbone torsions" option but wondering if there's any other tools available in coot or elsewhere? Thanks Medhanjali Dasgupta

Re: [ccp4bb] Tools for structure-based multiple sequence alignment

2023-03-03 Thread Pietro Roversi
Dear Manoj, I usually utilize SALIGN to produce structure-based sequence alignments: https://modbase.compbio.ucsf.edu/salign/ Ciao Pietro On 02-03-2023 08:45, Manoj N wrote: Dear all, We want to generate a structure-based multiple sequence alignment for a large number of hom

[ccp4bb] Job opening for a post-doctoral research fellow in the cryo-EM facility of the European Synchrotron, ESRF, France

2023-03-03 Thread David FLOT
Forwarded Message Subject: Job opening for a post-doctoral research fellow in the cryo-EM facility of the European Synchrotron, ESRF, France Date: Fri, 3 Mar 2023 09:28:36 +0100 From: Eaazhisai KANDIAH Organization: ESRF To: cc...@jiscmail.ac.uk Dear Collea