[ccp4bb] Postdoctoral position in Structural Biology at Uppsala University

2022-11-23 Thread Sebastian Deindl
Dear all, I have an opening for a postdoctoral fellow (funded by a stipend) in my group at the Department of Cell and Molecular Biology, Uppsala University, Sweden. The postdoctoral fellow will be working towards the structure determination of nucleosomes in complex with chromatin-binding facto

[ccp4bb] Against Parasite Publishers: Making Journals Free

2022-11-23 Thread V F
Against Parasite Publishers: Making Journals Free (by Basic Research Community for Physics) https://doi.org/10.5281/zenodo.7212922 or https://zenodo.org/record/7212922 To unsubscribe from the CCP4BB list, click the follow

Re: [ccp4bb] PDBeMotif and like methods

2022-11-23 Thread Tim
hi andy, we have recently applied this server http://211.25.251.163/assam/imaaagine/ Nadzirin,N.,Willett,P.,Artymiuk,P. J.&Firdaus-Raih,M.IMAAAGINE: a webserver for searching hypothetical 3D amino acid side chain arrangements in the Protein Data Bank.Nucleic Acids Res.41,W432–440(2013) to fin

Re: [ccp4bb] PDBeMotif and like methods

2022-11-23 Thread Julia Griese
Hi Andy, I’ve used PINTS, http://www.russelllab.org/cgi-bin/tools/pints.pl Hope that helps. Best, Julia -- Dr. Julia Griese Assistant Professor, Docent Department of Cell and Molecular Biology Uppsala University BMC, Box 596 SE-75124 Uppsala Sweden email: julia.gri...@icm.uu.se phone: +46-(0

[ccp4bb] PDBeMotif and like methods

2022-11-23 Thread Andrew Lovering
Dear CCP4 list, I have just tried accessing the "old" EBI PDBeMotif link and it is non-functional. Assuming that it may or may not be moved/unavailable, I am asking what your favourite methods are for mapping similar residue interactions in dissimilar folds i.e. if you have a nice network of 3

Re: [ccp4bb] IUCr in 2023

2022-11-23 Thread Gerard Bricogne
Sorry ... IUCr2023 of course ... . -- On Wed, Nov 23, 2022 at 09:36:35AM +, Gerard Bricogne wrote: > Dear Tom, > > Thank you for this most welcome news! The previous deadline was *nine > months* before the start of the meeting, that really didn't make sense. For > the last "normal" meeti

Re: [ccp4bb] IUCr in 2023

2022-11-23 Thread Gerard Bricogne
Dear Tom, Thank you for this most welcome news! The previous deadline was *nine months* before the start of the meeting, that really didn't make sense. For the last "normal" meeting in 2017, it had been February 28th, i.e. *six* months ahead. It rather looked like the Event Organiser ta

[ccp4bb] virtual EMBO workshop 17-19 April 2023

2022-11-23 Thread Sofia Kapetanaki
Dear Colleagues, We would like to announce the EMBO workshop: *Time-resolved spectroscopy meets time-resolved crystallography. The future of dynamic photobiology *which will take place virtually from 17th to 19th April 2023. This workshop aims to bring together workers from the fields of time