Hi Ravikumar,
next nightly build of Phenix (dev-4661 and up, likely becomes available
tomorrow) found in the usual place
https://phenix-online.org/download/nightly_builds.cgi?show_all=1
will contain the new command line program
called phenix.map_values_along_line.
The program inputs the map (rea
Dear Pavel,
I guess you know that Billy made cctbx "available" on colab. So
installing cctbx and python is not needed any more.
https://github.com/phenix-project/Colabs/blob/main/Start_cctbx.ipynb
There are also some descriptions of some modifications to
the installation so that everything w
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Why why why doesn’t REFMAC just write a new column – something like FOBS_mod?
Shouldn’t it be a general rule that if you change something, you give it a
different name?
From: CCP4 bulletin board on behalf of Randy John Read
Date: Wednesday, July 13, 2022 at 5:22 AM
To: CCP4BB@JISCMAIL.AC.UK
Hi Ravikumar,
this can be easily done in CCTBX, but requires knowing CCTBX and Python
scripting. I can write a script-example for you, if interested, or feel
free to give it a try yourself and let me know if you need any help.
Pavel
On Wed, Jul 13, 2022 at 11:19 AM Ravikumar wrote:
>
> Dear all,
Also, this might be a good time for the regular reminder *never* to use the MTZ
output by Refmac as input for anything else, because the FOBS coming out of
Refmac is not the same as the FOBS going in. It might well have had various
corrections applied, including a correction for twinning. I thin
Dear Vera,
On Wed, Jul 13, 2022 at 10:13:28AM +0200, Vera Pfanzagl wrote:
> You write that I should make sure REFMAC reads in the test-set from
> the staraniso.mtz and does not replace it with a new one. This
> would only be the case if it generates a new test set when I
> initially import the re
Dear Clemens,
Thank you so much! This was in the end the solution =) A lot of combining mtz
files back and forth=)
But as always one last thing remains...
You write that I should make sure REFMAC reads in the test-set from the
staraniso.mtz and does not replace it with a new one.
This wou
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