Re: [ccp4bb] off-topic: structural motif / domain comparison

2021-08-05 Thread Jan Dohnalek
Like PDBeFOLD search? https://www.ebi.ac.uk/msd-srv/ssm/ Jan On Fri, Aug 6, 2021 at 8:43 AM Sam Tang wrote: > Dear all > > Sorry for an off-topic question here. I wonder if anyone may be aware of > any search program which allows one to 'blast' a protein domain just like > we 'blast' a protein

[ccp4bb] off-topic: structural motif / domain comparison

2021-08-05 Thread Sam Tang
Dear all Sorry for an off-topic question here. I wonder if anyone may be aware of any search program which allows one to 'blast' a protein domain just like we 'blast' a protein sequence? For example I have an epitope in hand and would like to find out whether this also exists in other proteins. Mo

Re: [ccp4bb] using chooch

2021-08-05 Thread Sherrell, Darren Andrew
I made my own orange booklet for binding and emission energies for all the elements. You should be able to convert to a csv pretty easily and open it as a txt file. Darren From: CCP4 bulletin board on behalf of Jon Cooper <488a26d62010-dmarc-requ...@jiscmail.ac.uk> Reply-To: Jon Cooper D

[ccp4bb] Postdoc position available

2021-08-05 Thread Tobias Beck
Dear all, We have an opening for a Postdoc position in my group. The Beck group is located at the University of Hamburg, with labs well-equipped for nano chemistry and protein chemistry, and supported with computational infrastructure for protein design. Moreover, state-of-the-art facilities for s

[ccp4bb] Call open for beamtime at DESY beamline P11, PETRA III, Hamburg

2021-08-05 Thread Hakanpää , Johanna
Dear all, We would like to inform you that the Call for Proposals (regular proposals) is now open for DESY beamline P11 at the PETRA III synchrotron in Hamburg. This call relates to remote and onsite access during the run period January-July 2022. The deadline for submission is

[ccp4bb] Instruct-ERIC and iNEXT-Discovery: Second Joint Access Call

2021-08-05 Thread Claudia Alén Amaro
[Instruct-ERIC logo] [Instruct-ERIC] [LinkedIn] [Twitter] Dear All The structural biology platforms Instruct-ERIC and iNEXT-Discovery are delight