ReadySet
On Thu, Apr 30, 2020 at 6:23 PM Sharan Karade
wrote:
> Hi,
> I think, you can generate new restrain file for your ligand and load
> before you do refine in COOT for next time. I have query that, how did you
> generate restrain file for ligand (elbow or readyset in phenix)?.
>
>
>
>
> O
Hi,
I think, you can generate new restrain file for your ligand and load
before you do refine in COOT for next time. I have query that, how did you
generate restrain file for ligand (elbow or readyset in phenix)?.
On Thu, Apr 30, 2020 at 5:06 PM Muhammad Bashir Khan
wrote:
> Hi Folks;
>
> I
Thanks all - also for jogging my memory.
Peter, I think Garib ended up doing something statistically
sophisticated, but I couldn't track down the slides or documentation I
remember seeing somewhere. But I didn't dig very hard, and if it's been
there since 2012, then that explains why I failed
On 30/04/2020 21:55, Muhammad Bashir Khan wrote:
I want to ask about the ligand refinement in coot. Earlier I was able
to refine the ligand in the coot using real space refine zone but now
by some reason when I want to refine the ligand in coot it asks me
"Refinement setup failure failed to
On 30/04/2020 21:55, Muhammad Bashir Khan wrote:
I want to ask about the ligand refinement in coot. Earlier I was able
to refine the ligand in the coot using real space refine zone but now
by some reason when I want to refine the ligand in coot it asks me
"Refinement setup failure failed to f
Hi Folks;
I want to ask about the ligand refinement in coot. Earlier I was able to
refine the ligand in the coot using real space refine zone but now by some
reason when I want to refine the ligand in coot it asks me
"Refinement setup failure failed to find restrained for XYZ". Do not know
what ha
Hi, Sam,
it should be fine but as an additional safety measure I would recommend
installing miniconda and create separate virtual environment for cryoem
related software.
чт, 30 апр. 2020 г. в 13:45, Colin Palmer - UKRI STFC <
colin.pal...@stfc.ac.uk>:
> Hi Sam,
>
> There is no problem with this:
Hi Sam,
There is no problem with this: CCP-EM is designed to work with CCP4. In fact
many of the CCP-EM tasks (such as Refmac) require programs supplied by CCP4, so
it’s useful to have both installed.
Both packages do supply a version of Coot. They shouldn’t interfere with each
other, but if y
Hi,
I'm going to install ccpEM on a same fedora 30 workstation that already has
ccp4 will they touch on my pre-existing Coot and Refmac setup?
Maybe I'm just worrying too much..?
Cheers
Sam
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