Re: [ccp4bb] protein protein interactions

2020-02-10 Thread 00000c2488af9525-dmarc-request
Hello, if you mean theoretical docking, here is an old list of links:https://zlab.umassmed.edu/zdock/dockingsites.shtmlSome of these will still be maintained.Jon CooperOn 10 Feb 2020 16:50, Sarah Bowman wrote: Hi Careina,   There’s a program called FRODOCK that generates predictions of how tw

[ccp4bb] Postdoctoral positions(2) in cryo-EM

2020-02-10 Thread Alessandro Vannini
Dear all, I would like to draw your attention to two postdoctoral positions available immediately in my laboratory to work on cryo-EM determination of complexes operating at the interface of SMC complexes and the transcription apparatus. The projects are well suited for individual with good exp

[ccp4bb] Fwd: [ccp4bb] Fw: protein protein interactions

2020-02-10 Thread RUBEN SANCHEZ GARCIA
Dear Careina, I would recommend you our partner-specific binding site predictor: BIPSPI, that uses as input 2 sequences or 2 pdb files and proposes the binding site of the two partners. http://bipspi.cnb.csic.es/xgbPredApp/ Kind regards, Ruben Quoting "careinaedgo...@yahoo.com" <0

Re: [ccp4bb] protein protein interactions

2020-02-10 Thread Sarah Bowman
Hi Careina, There’s a program called FRODOCK that generates predictions of how two proteins could interact: http://chaconlab.org/modeling/frodock Cheers, Sarah Sarah EJ Bowman, PhD Associate Research Scientist, Hauptman-Woodward Medical Research Institute Director, High-Throughput Crystallizat

Re: [ccp4bb] Fw: protein protein interactions

2020-02-10 Thread Eleanor Dodson
pisa is good at this. Are they in the same pdb file? Eleanor On Mon, 10 Feb 2020 at 16:16, careinaedgo...@yahoo.com < 02531c126adf-dmarc-requ...@jiscmail.ac.uk> wrote: > > > Dear all > Apologies for off topic question but can anyone recommend good programs > for identifying docking interfaces

[ccp4bb] Fw: protein protein interactions

2020-02-10 Thread careinaedgo...@yahoo.com
Dear allApologies for off topic question but can anyone recommend good programs for identifying docking interfaces between two proteins. I do not know that these two proteins interact. I would like a level of confidence on a possible interaction. is there a good program to do this?kind reg

[ccp4bb] Higher Scientific Officer position available at The Institute of Cancer Research, London, UK

2020-02-10 Thread Rob Van Montfort
The Institute of Cancer Research, London, is one of the world’s most influential cancer research institutes, with an outstanding record of achievement dating back more than 100 years. We provided the first convincing evidence that DNA damage is the basic cause of cancer, laying the foundation f

[ccp4bb] Tenure track position in structural bioinformatics (Regensburg, Germany)

2020-02-10 Thread Remco Sprangers
Dear All, I would like to draw you attention to an opening for a tenure track professor position in "Structural Bioinformatics" at the Regensburg university (Germany). The official add can be found at: https://www.uni-regensburg.de/universitaet/stellenausschreibungen/professuren/index.html