Looking into this. The automutate works if it is any help.
Charles
On 23 Nov 2016, at 15:50, wtempel wrote:
> Hello,
> after installing updates 22 and 23 on an Ubuntu-14.04 (x86_64) box, I have
> yet to successfully “mutate” any amino acid residue in COOT.
> (setup-mutate 1) is printed to the
Same here on El Capitan 10.11.6.
Mutate & Auto Fit still works though, but Simple Mutate crashes.
Mark J van Raaij
CNB-CSIC
www.cnb.csic.es/~mjvanraaijOn 23 Nov 2016 16:57, Julian Nomme
wrote:
>
> Same here on masOS Sierra...
> Julian
>
> Le 11/23/16 4:55 PM, Isupov, Michail a écrit :
> > Hi,
Same here on masOS Sierra...
Julian
Le 11/23/16 4:55 PM, Isupov, Michail a écrit :
Hi,
I have already uninstalled the latest update (23), on Snow Leopard
the new COOT was crushing
on attempt to mutate residue in graphical interface.
Regards,
Misha
From:
Hi,
I have already uninstalled the latest update (23), on Snow Leopard
the new COOT was crushing
on attempt to mutate residue in graphical interface.
Regards,
Misha
From: CCP4 bulletin board [CCP4BB@JISCMAIL.AC.UK] on behalf of wtempel
[wtem...@gmail.com
Hello,
after installing updates 22 and 23 on an Ubuntu-14.04 (x86_64) box, I have
yet to successfully “mutate” any amino acid residue in COOT.
(setup-mutate 1) is printed to the terminal, followed by a line confirming
on which atom I have clicked, but the residue type selection dialog does
not appe
We are seeking highly motivated postdoc researchers to join us in
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Dear All
ccp4 update 23 has just been released. It contains
* coot:
- update to coot 0.8.7 on linux and os x
* phaser:
- Bug fixes: ccp4i and interaction with Arcimboldo
- Update: Improved treatment of systematically weak data (e.g. severe
anisotropy)
* ccp4i
- bug fi
I had the same question long ago and I was directed to the Verify3D
code, which is also not that easy to read these days. If you receive
any feedback, let me know. Perhaps there are also more recent
profile-based scores with available code somewhere?
2016-11-14 16:20 GMT-02:00, Hammond, Robert Gle
Hello everyone,
Maybe of interest/help to others:
The solution of my problem is a totally unexpected structural change of
2 out of 4 protein molecules in the asu! The straight forward solution
was additionally obscured through the presence of tNCS.
What I did:
- placed as many molecules as po
PyMol has good tools for this via scripts people have made available.
Simple arbitrary axis if you know where to draw it:
https://pymolwiki.org/index.php/Symmetry_Axis
Crystallographic symmetry tools:
https://pymolwiki.org/index.php/SuperSym
Visualizing the transformation between two selection
Dear Claire,you have only one dataset in the "group of datasets" being analysed
by BLEND. No dendrogram is supposed to be generated by BLEND with just one
dataset.
Concerning your second question, alternative indexing is managed internally by
POINTLESS, which BLEND calls when preparing merged da
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