Dear Xiaoming,
I would try using the graphical interface within phenix refine to add in the
bond length/angle constraints for your link. This seemed to work fine with our
system without actually needing a link record.
J
-Original Message-
From: CCP4 bulletin board [mailto:CCP4BB@JISCMA
Xiaoming
Can you send me the three residues in question (or the whole model) and the
files you have so I can point you in the right direction.
Cheers
Nigel
On Thu, Apr 3, 2014 at 1:17 PM, Xiaoming Ren wrote:
> Dear all:
>
> I am encountering a problem. I built a monomer model which is a modif
Dear all:
I am encountering a problem. I built a monomer model which is a modified
nucleotide with Sketcher in ccp4 suite and generated the .cif file of this
monomer. However, I could not make it bind with other nucleotides in the
nucleic acid chain. I have tried to write LINK lines into PDB fi
Those who use lysozyme as a model protein should note that fungal spores of
an unknown strain can have a dramatic effect on lysozyme crystal
nucleation, as noticed by my student many years ago (I wasn't completely
happy with the report because we never knew what we were working with!).
Chayen, N.
Hi all ..
loggraph seems to be broken on Redhat 6.5 . It may be a "blt" error. Can
someone confirm that they can get loggraph to work on Redhat Enterprise 6.5
with the ccp4 provided binaries.
Sadly Redhat nor Activestate provide "blt" replacements
In all cases the loggraph starts a blank window
I think fungus dependent crystallization has occurred for some
labs. A paper that pops into mind is from my graduate
laboratory (not my work though):
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2225192/
Reza
Reza Khayat, PhD
Assistant Professor
The City College of New York
Department of Chemis
I once encountered mold-dependent crystallization of a protein. Wouldn't that
have made for a lively Methods section?
Luckily, we determined the structure from crystals derived from a different,
non-moldy condition. Whew.
Chad
From: Artem Evdokimov
To: CC
Common molds like aspergillus or penicillium. After a while you sometimes
get sporangia, then you can tell with more certainty. ..
A.
On Apr 3, 2014 3:50 AM, "Bernhard Rupp" wrote:
> Several people were asking what this FCFV tentacles actually might be. I
> think it is some fungus/yeast growing
Dear all,
A 4-year PhD position in Structural Biology starting August 2014 is available
at University of Oslo, Department of Biosciences, Section for Biochemistry and
Molecular Biology. The position is funded by the Research Council of Norway and
the University of Oslo.
The project is dealin
Several people were asking what this FCFV tentacles actually might be. I
think it is some fungus/yeast growing out of nutritious drops. Does resemble
fungus/mushroom mycelium. I have also some that look like huge
bacteriophages with nice heads on them, probably yeast buds. There is also a
yeast lab
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