I am trying to include a N-terminal acetylated methionine in my model.
I replaced my methionine with a AME residue from the pdb data bank and
included a link command to connect the C from AME with the N of the
second residue. The AME is defined as HETATM. When I try to regularize
this structure in
On Fri, 2013-09-20 at 17:30 +0100, Marcin Wojdyr wrote:
> On Fri, Sep 20, 2013 at 11:51:57AM +0100, Peter Keller wrote:
>
> > The STAR grammar in chapter 2.1 is the accurate one. If you look at page
> > 18, you will see that the productions for quoted text strings are
> > completely different from
On Fri, Sep 20, 2013 at 11:51:57AM +0100, Peter Keller wrote:
> The STAR grammar in chapter 2.1 is the accurate one. If you look at page
> 18, you will see that the productions for quoted text strings are
> completely different from the ones in chapter 2.2.
Different, but look equivalent to me.
B
Hi All,
Sorry for the non-CCP4 issue. A student I am mentoring asked me for a favor to
post this information. A German master student is looking for a research
opportunity for half a year in the US. He has experience with chromatography
and has some research work at Roche. Please either email
Hi Folmer,
As I said- " I think its not free any more" is indicative that I am not sure of
its status. In addition to that I do not use Pymol "much".
Thanks for the correction.
Best
Dr. Anindito Sen (Ph.D)
Department of Cell Biology & Anatomy
Graduate School of Medicine
University of Tok
Hi Anindito Sen
2013/9/20 Anindito Sen
>
>
> . You can also use Pymol (but I think thats not free any more??).
>
>
>
>
I do not know what your definition of "free" is, but PyMOL is an
open-source project. You can download the code from
http://sourceforge.net/projects/pymol/
To me, that mean
On Thu, 2013-09-19 at 18:00 +0100, Marcin Wojdyr wrote:
> On Thu, Sep 19, 2013 at 04:38:12PM +0100, Peter Keller wrote:
>
> > >
> > > If there are discrepancies between IUCR website and IT vol.G and it would
> > > be worth to list them.
> >
> > It is not a matter of discrepancies: they are rathe
Hi Oliver,
Use CHIMERA- http://www.cgl.ucsf.edu/chimera/
There are video tutorials for docking-
http://www.cgl.ucsf.edu/chimera/videodoc/videodoc.html
This is a very good package.
While I have used Situs colores, I find this package more versatile and useful.
You can also use Pymol (but I thi
Dear All,
For anyone out there with an interest in methods development for
experimental phasing we would like to draw your attention to a
post-doctoral position currently available at Diamond Light Source:
http://www.diamond.ac.uk/Home/Jobs/Current/DIA0868_SB.html
This position is in collaborati
When we have needed to do something like this, the following procedure has
worked pretty well for us:
1. Define the volume containing the density into which a model should be docked
(most easily as atoms in a PDB file specifying the centres of spheres), then
get structure factors corresponding
Dear All,
A postdoc position at the University of Geneva to work on lipid kinases
is available starting from the 1st of January 2014.
We are seeking a highly motivated and independent postdoc to untangle
the regulation of PI3Ks lipid kinases using a multidisciplinary approach
based on struct
Dear All,
Two Research Associate positions have become available in the laboratory for
crystallisation and crystallographic studies on mammalian transporter in the
Membrane Protein Crystallography Laboratory at the Research Complex in Harwell
(RCaH) near Didcot, Oxfordshire. The laboratory is h
12 matches
Mail list logo
