Dear Tom,
I find this suggestion of using the full images an excellent and visionary one.
So, how to implement it?
We are part way along the path with James Holton's reverse Mosflm.
The computer memory challenge could be ameliorated by simple pixel averaging at
least initially.
The diffuse scatte
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Dear ansuman,
'rmsd' stands for 'root mean square deviation', i.e. in the context of
your first question you must sum the _square_ of the atomwise deviations
and then take the square root.
question two: I contradict: residues ARE static in this conte
The X-ray course at the University of Oulu, Department of
Biochemistry in week-38, September 16-20, 2013.
The course is aimed at providing hands-on training for data collection
and data processing with our in-house equipment. The Bruker data
collection unit will be available for course participan
Dear all,
I have 2 queries regarding RMSD calculation and interpretation.
1. When 2 residue stretches are superposed using CCP4 superpose, the log file
shows the atomwise-deviations between matched residue pairs. How to find the
total deviation/RMSD between a specified residue pair -
Hi Douglas,
So will you and/or other participants in this fascinating and informative
thread pick up the glove and implement the suggestions made here? At least
we'll know if it makes a change to our data. In any case I doubt that it can
harm.
Cheers,
Boaz
Boaz Shaanan, Ph.D.
Dep
