The Yip laboratory is a dynamic research group at the Life Science
Institute of the University of British Columbia. Our group uses
single-particle electron microscopy (EM) methods, yeast genetics, and other
biochemical and molecular biology approaches to study the structure,
organization, and funct
Dear all,
I have tried the procedure recommended by Zbyszek, expanding data from a
higher symmetry and keeping the R-free set. But the map for third molecule
(new molecule placed) are still very bad, even when a tried to reprocess
data in P1 or P2 (P 1 21 1). The previous placed molecule (present
Hi Nicolas,
several possibilities are available for you:
- use rigid_bod_refine_zone
(http://www.biop.ox.ac.uk/coot/doc/coot/rigid_002dbody_002drefine_002dzone.html#rigid_002dbody_002drefine_002dzone)
- use rigid_body_refine_by_atom_selection (see e.g.
https://www.jiscmail.ac.uk/cgi-bin/webadmi
On Thu, 2013-03-21 at 23:29 -0400, Chen Zhao wrote:
> Dear all,
>
> Does anybody know some softwares for aligning electron density maps?
>
> I tried transforming map by SQL model fit extension in COOT, which
> turned out to be not working: the map it transformed is the one
> supposed to be fixed.
Have you tried with Interactome3D?
http://interactome3d.irbbarcelona.org
Best,
Roberto
Dear all,
Britain is organizing an on-line poll of the top 20th century "British
innovations" backed by the Science Museum, the Royal Academy etc. Voting
ends on March 25. The URL for this on-line poll is
http://www.topbritishinnovations.org/ , then select "1 - Vote for the
Past innovation".
