Re: [ccp4bb] Off-topic PyMOL Issue

2013-03-02 Thread Takanori Nakane
Dear Greg, The following might work: set cylinder_shader_ff_workaround, on Best regards, Takanori Nakane

Re: [ccp4bb] laboratory phage infection [SEC=UNCLASSIFIED]

2013-03-02 Thread Opher Gileadi
Hi, We had a massive phage infection at the SGC in 2004; all our washing and sterilization efforts could only solve the problem temporarily. I then recovered a phage-resistant subclone of BL21(DE3), and prepared derivative strains with pRARE2 (the tRNA plasmid in Rosetta2) or other plasmids. We

Re: [ccp4bb] laboratory phage infection [SEC=UNCLASSIFIED]

2013-03-02 Thread Antony Oliver
Dear Aidong, Some thoughts... Are you sure the problem is actually phage-related? I ask because you are still having problems using phage-resistant stains... Acid-washing your glassware, and a long-dry autoclave sterilisation (as previously suggested) should really do the trick. A good *manu

Re: [ccp4bb] laboratory phage infection

2013-03-02 Thread Carmela GarcĂ­a
Hi Aidong, In our lab we are working with phages and sometimes we have the same problem. But usually, the contamination is with other phages, not with the ones we are growing. I can give you some ideas we tried during the last year: - Are you sure that nobody is growing phages nearby? In that case

Re: [ccp4bb] laboratory phage infection [SEC=UNCLASSIFIED]

2013-03-02 Thread Matthias Zebisch
Dear Aidong, we never had that problem but I heard that only long dry(!) heat treatment of glassware destroys the phages. No need to say that you have to do it with ALL your glassware. Good luck, Matthias - Dr. Matthias Zebisch Division of Structural B

Re: [ccp4bb] laboratory phage infection [SEC=UNCLASSIFIED]

2013-03-02 Thread aidong
Many thanks for your rapid inputs. We used to make glyerol stocks but now we do not since the protein expression is not stable. Our lab is about 10 students, who have to make their own proteins so our three large-scale shakers are very crowded every day. We did try a formaldehyde gas trea

[ccp4bb] laboratory phage infection

2013-03-02 Thread aidong
Hi All, Really sorry for my non-CCP4 related question. Our lab mainly uses bacterial cultures to produce targets proteins for crystallizations. However, we have been struggling with phage infections to our bacterial cultures for a quite long time. To control its devastating effects, we h