I wonder if it's not in the output of pisa from ccp4mg.
On 03/05/2012 12:30 AM, Bart Hazes wrote:
Hi Fred,
The SSBOND server has indeed been moved as we have relocated to a new
building. SSBOND is still available at the new server address:
http://hazeslab.med.ualberta.ca/forms/ssbond.html
This
Is this twinning or several crystals indexed according to different
conventions? You usually see evidence of twinning for each crystal if it is
really there..
Trigonal data can be indexed as h,k,l k,h,-k -h,-k,l or -k,-h,-l of course
so you have a 75% chance of getting the 2nd crystal on a dif
Presumably your data is quite anisotropic, and low resolution, so it is
quite likely that a TLS model will give much better description of the B
factors than more classical refinement.
Modelling solvent at that resolotion will be tricky of course.
Elesnor
On Mar 4 2012, Joseph Cockburn wrote
Hi Rajesh,
If you're seeing a lot of extra density coming up in the map in regions
where you previously added waters, is it possible that this extra density
corresponds to a part of your protein that you previously thought was
disordered and is thus missing from the current model? At this resolutio
Hi Fred,
The SSBOND server has indeed been moved as we have relocated to a new
building. SSBOND is still available at the new server address:
http://hazeslab.med.ualberta.ca/forms/ssbond.html
This was my first ever program,with help from Bauke Dijkstra, and I was
pleasantly surprised how man
If you are looking for predicting disulfide bonds, then this may be
useful
http://lmgtfy.com/?q=predict+disulfide+bonds
Cheers,
Ed.
--
Hurry up, before we all come back to our senses!
Julian, King of Lemurs
I'd google for "Bart Hazes" and "SSBOND" myself. There is (or was) a server,
and the publication is Prot. Eng. 1988, 119, 25 (PMID 3244694). The server
seems to be down or has moved.
HTH, Fred.
> Message du 04/03/12 05:07
> De : "Naveed A Nadvi"
> A : CCP4BB@JISCMAIL.AC.UK
> Copie à :
> Objet
