Hi,
There is an option in the molrep interface (in the search parameters
tab) to output all models closest to the input coordinate file With a
bit of luck, that should do it.
Johan
On 24 February 2012 00:07, Gloria Borgstahl wrote:
> Hello all,
> We are solving a superstructure of a protein com
Hi Gloria,
It depends on if you mean hard as in thinking up a slick trick, or hard as
in maybe 20-30 mins of tedious work. I had the same problem with 18 in the
ASM, where the solution had scattered models, but didn't want to think
about it, so just used pymol.
1) open the first model with the or
I should have been more clear. If your protein is insoluble aggregate,
you can use crystal screen results to get an idea of what buffer
conditions favor solubility (and hopefully monodispersity). An example
is described nicely in Collins et al, Acta Cryst F 61:1035.
Ho
Ho Leung Ng
University of
There is an immediate opening for a Post Doctoral Research Associate in the
group of Dr. Lan Guan, Department of Cell Physiology and Molecular Biophysics
at Texas Tech University Health Science Center, Lubbock, TX, focuses on the
structure determination of a sugar transport protein by 3-D X-ray
Hello all,
We are solving a superstructure of a protein complex with 2 parts.
Built 6 of the first part and they are all sensibly stacked next to each other.
Then we read this into molrep as the "fixed" model and solved for the
second part.
The solution was found but the 6 for the second model are
I installed CCP4 6.2.0 on Scientific Linux 6.1 (x86_64) on Feb 9,
including the versions of tcl & tk offered by CCP4.
When I try to run imosflm, I get the following:
MOSFLM_EXEC set to /usr/local/xtal/ccp4_master/ccp4-6.2.0/bin/ipmosflm
testing MOSFLM_WISH (/usr/local/xtal/ccp4_master/tcl
On 02/23/12 14:16, Hena Dutta wrote:
Hello,
Is anyone using nvidia quadro 4000 graphics card for linux environment
to see stereo in pymol, coot, O or similar programs? If yes, I like to
buy that.
Thanks...
Hena
Yes, we have a Quadro 4000. It seems to work on both Fedora 15 and
Scientific Linu
The Joint Center for Innovative Membrane Protein Technologies (JCIMPT),
operated at The Scripps Research Institute (TSRI) and funded by the NIH Common
Fund's Structural Biology program, is teaming up with Formulatrix to host a
workshop on "Lipidic Cubic Phase (LCP) Tools & Technologies" followin
Hello,
Is anyone using nvidia quadro 4000 graphics card for linux environment to
see stereo in pymol, coot, O or similar programs? If yes, I like to buy
that.
Thanks...
Hena
When using a multi-copy search/fitting two models in Molrep, I encounter a
fortran runtime error. This happens at the stage where the second model is
being read in. I see that there are some previous posts concerning this. I did
try using a different version (as previous posters reported working
Is there someone interested to purchase 1 ml of PROTEIN A horseradish
peroxidase (GE-Healtcare cod. NA9120) ?
The sample is yet sealed (expiry 24/01/2014). I could exchange this
product (GE price list450 Euro) with another such as Prescission
Protease or Thrombine (price ca. 250-300 Euro).
Inte
MOLEMAN2 is your friend.
Stats: http://xray.bmc.uu.se/usf/moleman2_man.html#S50
Plots: http://xray.bmc.uu.se/usf/moleman2_man.html#S57
--dvd
Will you please tell me a server of software which can draw a curve for the
B factor of the atoms in a protein PDB file from the first residue to the
12 matches
Mail list logo
