Hi,
I just installed centos4.4 and the latest version of CCP4-6.0.2.
I used the auto install and the runnable executables went just fine. Ipmosflm
opens up just fine and can find spot, index, and refine, but I can't use the
mouse to enlarge an area, which is especially needed when you have crappy
Hi,
Could anybody enlighten me about the current best practice
for calculating the e.s.u for atomic positions of individual atoms
based on B-factor, R-free as well as completeness of data and model.
I have been digging through the literature to find a good estimator
of the estimated standard unc
Hello Yingjie Peng
You can do this in SPOCK. You can select all the residues that make up the
pocket and select calculate, volume from the menu for these residues. Hope
this works.
Arti
> Dear all,
>
>Is there anyone who can tell me how to calculate the volume of
> substrate
> binding pocket i
On Wed, 11 Apr 2007, [ISO-8859-1] "F.Xavier Gomis-R?th" wrote:
> I fully agree with Hermann due to obvious reasons
> Xavier
For antibodies there are several numbering schemes in use, or at least
proposed (Kabat, Chothia, AHo, IMGT, ..). So it would be nice to have a
file format that allows se
Dear all,
Is there anyone who can tell me how to calculate the volume of substrate
binding pocket in a protein structure? I want to use it to the quantify the
conformational change caused by induced fitting. Thanks very much.
Yingjie Peng
Yingjie PENG, Ph.D. student
Structural Biology Group
Dear Eleonor and Bullitin board people,
I would like to comment on the "weird numbering schemes" mentioned in the email
below. Although they make life (slightly) more difficult for developers of
crystallographic software, they make life much easier for many of the rest of
the world and have been
